Package: MDMR 0.5.1

MDMR: Multivariate Distance Matrix Regression

This package allows users to conduct multivariate distance matrix regression using analytic p-values and compute measures of effect size. For details on the method, see McArtor, Lubke, & Bergeman (2017) <https://doi.org/10.1007/s11336-016-9527-8>.

Authors:Daniel B. McArtor [aut, cre]

MDMR_0.5.1.tar.gz
MDMR_0.5.1.zip(r-4.5)MDMR_0.5.1.zip(r-4.4)MDMR_0.5.1.zip(r-4.3)
MDMR_0.5.1.tgz(r-4.4-any)MDMR_0.5.1.tgz(r-4.3-any)
MDMR_0.5.1.tar.gz(r-4.5-noble)MDMR_0.5.1.tar.gz(r-4.4-noble)
MDMR_0.5.1.tgz(r-4.4-emscripten)MDMR_0.5.1.tgz(r-4.3-emscripten)
MDMR.pdf |MDMR.html✨
MDMR/json (API)

# Install 'MDMR' in R:

install.packages('MDMR', repos = c('https://dmcartor.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/dmcartor/mdmr/issues

Datasets:

X.clust - Simulated clustered predictor data to illustrate the Mixed-MDMR function
X.mdmr - Simulated predictor data to illustrate the MDMR package.
Y.clust - Simulated clustered outcome data to illustrate the Mixed-MDMR function
Y.mdmr - Simulated outcome data to illustrate the MDMR package.

On CRAN:

5.65 score 6 stars 15 scripts 229 downloads 11 mentions 4 exports 61 dependencies

Last updated 7 years agofrom:458d979a0a. Checks:OK: 5 NOTE: 2. Indexed: yes.

Target	Result	Date
Doc / Vignettes	OK	Nov 21 2024
R-4.5-win	NOTE	Nov 21 2024
R-4.5-linux	NOTE	Nov 21 2024
R-4.4-win	OK	Nov 21 2024
R-4.4-mac	OK	Nov 21 2024
R-4.3-win	OK	Nov 21 2024
R-4.3-mac	OK	Nov 21 2024

Exports:delta gower mdmr mixed.mdmr

Dependencies:abind backports boot broom car carData cli colorspace CompQuadForm cowplot cpp11 Deriv doBy dplyr fansi farver Formula generics ggplot2 glue gtable isoband labeling lattice lifecycle lme4 magrittr MASS Matrix MatrixModels mgcv microbenchmark minqa modelr munsell nlme nloptr nnet numDeriv pbkrtest pillar pkgconfig purrr quantreg R6 RColorBrewer Rcpp RcppEigen rlang scales SparseM stringi stringr survival tibble tidyr tidyselect utf8 vctrs viridisLite withr

Using the MDMR Package

Daniel McArtor

Rendered frommdmr-vignette.Rmdusingknitr::rmarkdownon Nov 21 2024.

Last update: 2018-02-11
Started: 2016-01-27

Citation

Development and contributors

Readme and manuals

Help Manual

Help page	Topics
Multivariate Distance Matrix Regression	MDMR-package MDMR
Compute univariate MDMR effect sizes	delta
Compute Gower's centered similarity matrix from a distance matrix	gower
Conduct MDMR with analytic p-values	mdmr
Fit Mixed-MDMR models	mixed.mdmr
Print MDMR Object	print.mdmr
Print Mixed MDMR Object	print.mixed.mdmr
Summarizing MDMR Results	summary.mdmr
Summarizing Mixed MDMR Results	summary.mixed.mdmr
Simulated clustered predictor data to illustrate the Mixed-MDMR function	X.clust
Simulated predictor data to illustrate the MDMR package.	X.mdmr
Simulated clustered outcome data to illustrate the Mixed-MDMR function	Y.clust
Simulated outcome data to illustrate the MDMR package.	Y.mdmr